Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKW-KHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ |
1T67 Chain:A ((55-356)) | ------------------------------------------------RIVKPKVASMEEMATFHTDAYLQHLQKVSQ------DSIEYGLGYDCPAT-EGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF-ERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKC---LKYILQWQL--ATLILGGGGYNLANTA-RCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDR--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T67.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -179977 for 2605 contacts (-69.1/contact) +
2D Compatibility (PS) -31338 + (NN) -11072 + (LL) 6180
1D Compatibility (HY) -16800 + (ID) 4050
Total energy: -237057.0 ( -91.00 by residue)
QMean score : 0.459
|
|
|