Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHYHFVGIKGSGMSSLAQIMHDLGHEVQGSDIENYVFTEVALRNKGIKILPFDANNIKEDMVVIQGNAFASSHEEIVRAHQLKLDVVSYNDFLGQIIDQYTSVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGD-GTGMGLPESDYFAFEACEYRR-----------HFLS--YKPDYAIMTNIDFDHPDYFKDINDVFDAFQEMAHNVKKG--IIAWGDDEHLRKIEADVPIYYYGFKDSDDIYAQNIQITDKGTAFD-VYVDGEFYDHFLS-PQYGDHTVLNALAVIAISYLEKLDVTNIKEALETFGGVKRRFNETTIAN--QVIVDDYAHHPREISATIETARKKYPHKEVVAVFQPHTFSRTQAFLNEFAESLSKADRVFLCEIFGSIRENTGALTIQDLIDKIEGASLINEDSINVLEQFDNAVVLFMGAGDIQKLQNAYLDKLGMKNAF |
| 3ZM5 Chain:A ((104-338)) | --------------------------------------------------------------------------------------------------------AVTGSNGKTTTKDMLAHLLSTRYKTYKTQGNYNNEIGLPYTVLHMPEGTEKLVLEMGQDHLGDIHLLSELARPKTAIVTLVGEAHLAFFKDRSEIAKGKMQIADGMASGSLLLAPADPIVEDYLPIDKKVVRFG-------QGAELEITDLVERKDSLTFKANFLEQALDLPVTGKYNATNAMIASYVALQEGVSEEQIRLAFQHLELTRNRTEWKKAANGADILSDVYNANPTAMKLILET--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85047 for 1559 contacts (-54.6/contact) +
2D Compatibility (PS) -22351 + (NN) -3444 + (LL) 16120
1D Compatibility (HY) -4400 + (ID) 2800
Total energy: -101922.0 ( -65.38 by residue)
QMean score : 0.376
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