Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTTLATLIFLVTLLFVLWQPKGLDIGITALTGAFIAVITGVVSFSDVFEVTGIVWNATLTF--VSVILISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIILLGAIVAAFFANDGAALILTPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIVSNLVNIISAD-YFHVGFVRYFSRMIIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKHPKDAINDLKLF-KISWIVLVILL-----FGYLISEFTKIPV--SIFTGIIAFIFLMLAR----------KSNAVNIKQVIKGAPWNIVLFSIGMYIVVFGLRNAGITLILAKILEYISNYGLFSTILGMGFISAFLSSIMNNMPTVLIDAIAIGQSNVHGMLKEGLIYANVI-------------GSDLGPKITPIGSLAT----LLWL-HVLTQKDVKISWGTYFKTGIIITIPVLFITLIGLYLTLIIF |
| 5A07 Chain:A ((40-434)) | DHDAEVLDSIMDRLHEPLYEKDTFDPNEVLAENKQLYEEFLLQEISEP-KVDNLVRSGDPLAGKAKGTILSLVRNSDLEDIISSIQQLEEEYNKNFG-YPYTFLNDEEFTDEFKDGIKSILPKD------RVVEFGTIGPDNWNMPDSIDRERYDQEMDKMSKENIQYAEVESYHNMCRFYSKEFYHH--PLLSKYKYVWRL--------------------EPNVNFYCKINYDVFQFMNKNDKIYGFVLNLYDSPQTIETLWTSTMDFVEEHPNYLNVNGAFAWLKDNSQNPKNYDYTQGYSTCHFWTNFEIVDLDFLR---SEPYEKYMQYLEEKG-----------GFYYERWGDAPVRSLALALFADKSSIHWFRDIGYHHTPYTNCPTCPADSDRCNGNCVPGKFTPWSDLDNQNCQATWIRHSMSEEELE------------------------MY------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -368664 for 2673 contacts (-137.9/contact) +
2D Compatibility (PS) -36342 + (NN) 419 + (LL) 6612
1D Compatibility (HY) -6800 + (ID) 2600
Total energy: -407375.0 ( -152.40 by residue)
QMean score : 0.109
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