Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITFENIQQLEKYTLMTMHGLFNQLKLGIISIDNAEHTLFTPYMMESLSSLGVKPD-------IIDLIHKGTELEDFAAFNLSIEDTVTVCLQRTEELLNQYKNVEFNDKILINWRIIQE
1W2I Chain:A ((18-59))
--------------------------------------GFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDE-ERVEALI---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1W2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5222 for 188 contacts (-27.8/contact) +
2D Compatibility (PS) -3669 + (NN) 1244 + (LL) 7384
1D Compatibility (HY) -800 + (ID) 450
Total energy: -1513.0 ( -8.05 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1W2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2I-query.scw
PDB file :
Tito_Scwrl_1W2I.pdb
: