Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDN-FEKLRKDIGIVFQNPDNQFVGSIVKYDVAFG-LENHAVPHDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVYKEGTATEIFDHA-EELTRIGLDLPFPIKINQMLGHQTSFLTYEGLVDQL
4U00 Chain:A ((19-235))-----------------------VLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSVKDDRALREIRREVGMVFQQ-FNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDL-AQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTR-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4U00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95341 for 1688 contacts (-56.5/contact) +
2D Compatibility (PS) -23731 + (NN) -13282 + (LL) 3636
1D Compatibility (HY) -18000 + (ID) 3750
Total energy: -150468.0 ( -89.14 by residue)
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_4U00.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U00-query.scw
PDB file : Tito_Scwrl_4U00.pdb: