Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKLQITLTRSVIGRPETQRKTVEALGLKKTNSSVVVEDNPAIRGQINKVKHLVTVEEK
3PIP Chain:W ((1-55))
---MKIKLVRSVIGRPGNQVKTVQALGLRKIGDSREVSDTPAVRGMVKTVKHLLEVQE-
General information:
TITO was launched using:
RESULT:
Template:
3PIP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28205 for 322 contacts (-87.6/contact) +
2D Compatibility (PS) -5535 + (NN) 1436 + (LL) 480
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -38574.0 ( -119.80 by residue)
QMean score : 0.761
(partial model without unconserved sides chains):
PDB file :
Tito_3PIP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PIP-query.scw
PDB file :
Tito_Scwrl_3PIP.pdb
: