Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKREIENRKKHKQPST---LNV-KANLEKLSL---DDMQVFRFNFRH-----------QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPE----FHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVTQNN |
3L1J Chain:A ((14-239)) | ----------------------------------------REKAVPPGTEVPLDVMRKGMEKVAFKAADDIQVEQVTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKP---QHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTN-DSFKTRAEADPM---GGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEV---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87983 for 1535 contacts (-57.3/contact) +
2D Compatibility (PS) -21054 + (NN) -9105 + (LL) 8276
1D Compatibility (HY) -7200 + (ID) 3100
Total energy: -120166.0 ( -78.28 by residue)
QMean score : 0.493
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