Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSN--VDLINYLPKNKIDSADVSQKLGYNIGG--NFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQ-NSKGVKWGVKANSFVT----PNGQVSAYDQY----LFAQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK |
| 1PVL Chain:A ((8-289)) | ----------------------------SEKKVDD---KITLYKTTATSDSDKLKISQILTFNFIKDKSYDKDTLILKAAGNIYSGYTKPNPKD-TISSQFYWGSKYNISINS-DSNDSVNVVDYAPKNQNEEFQVQQTVGYSYGGDINISNGLSGGG---KSFSETINYKQESYRTSLDKRTNFKKIGWDVEAHKIMNNGWGPYGRDSYHSTYGNEMFLGSRQSNLNAGQNFLEYHKMPVLSRGNFNPEFIGVLSRKQNAAKKSKITVTYQREMDRYTNFWNQLHWIGNNYKDENRATHTSI-YEVDWENHTVKL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26578 for 2088 contacts (-12.7/contact) +
2D Compatibility (PS) -28201 + (NN) -8960 + (LL) 2952
1D Compatibility (HY) -17600 + (ID) 4450
Total energy: -82837.0 ( -39.67 by residue)
QMean score : 0.289
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