Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIKYILVVFVLSLTVLSGCSLPGLGSKSTKNDVKITALSTSESQIISHMLRLLIEHDTHGKIKPTLVN--NLGSSTIQHNALINGDANISGVRYNGTDLTGALKEAPIKDPKKAMIA-TQQGFKK--KFDQ-----TFFDSYGFANTYAFMVTKETAKKYHLETVSDLAKHSKD---LRLGMDSSWMNRKGDGYEGFKKEYGFDFGTVRPMQIG-------LVYDALNTEKLDVALGYSTDGRIAAYDLKVLKDDKQFFPPYAASAVATNELLRQHPELKTTINKLTGKISTSEMQRLNYEADGKGKEPAVVAEEFLKKHHYFDKQKGGHK |
| 4WEP Chain:A ((4-281)) | ----------------------------------VKVGSKIDTEGALLGNIILQVLE--SHGV--PT-VNKVQLGTTPVVRGAITSGELDIY-PEYTGN---GAFF---FKDENDAAWKNAQQGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEGGTFKLAASAEFIER-ADALPAFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLREYPQMAQWLQPVFASLDAKTLQQLNASIAVEGLDAKKVAADYLKQKGWT-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87928 for 2187 contacts (-40.2/contact) +
2D Compatibility (PS) -27999 + (NN) -14319 + (LL) 2692
1D Compatibility (HY) -16400 + (ID) 3600
Total energy: -147554.0 ( -67.47 by residue)
QMean score : 0.477
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