Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCAKKEDLNAILAIYNDAIINTTAVYTYKPQTIDERIAWFETKQRNHEP-IFVFEENGSVLGFATFGSFRPWPAYQYTIEHSIYVDASARGKGIASQLLQRLIVEAKAKGYRTLVAGIDASNEASIKLHQKFNFKHAGTLTNVGYKFDYWLDLAFYELDLKD
4JXQ Chain:A ((6-168))
-LRDAVAADLRSITEIYRESVLNGVATYEETPPSEAEMALRFSTITGNGYPYVVALDERGAVIGYAYASAFRNRTAYRFLVEDSIYLSPEARGKGIGKALLSELVGRCTALGFRQMIAVIGGAHPSSIALHRALGFELQGLMKATGFKHGRWLDTAFMQRPLGE
General information:
TITO was launched using:
RESULT:
Template:
4JXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84439 for 1205 contacts (-70.1/contact) +
2D Compatibility (PS) -17825 + (NN) -6546 + (LL) 208
1D Compatibility (HY) -10400 + (ID) 2850
Total energy: -121852.0 ( -101.12 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_4JXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JXQ-query.scw
PDB file :
Tito_Scwrl_4JXQ.pdb
: