Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIILSASVKNLREISVKEKFLWLNAKSYLISVFAPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIAKSKIKTKTKCYRA
4J2L Chain:C ((1-25))
------------------MFVWTNVEPRSVAVFPWHSLVPFLA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4J2L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4000 for 62 contacts (-64.5/contact) +
2D Compatibility (PS) -2395 + (NN) 1805 + (LL) 6460
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -480.0 ( -7.74 by residue)
QMean score : -0.445
(partial model without unconserved sides chains):
PDB file :
Tito_4J2L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J2L-query.scw
PDB file :
Tito_Scwrl_4J2L.pdb
: