Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLNYDFLELVDDEPQRNTSLTSAIDKALADKKLARQNKPRVRVKDNLSLSETLDAYGRELSRLKNQQETIKASTIESSNLNSIVNKIKSGLPFGTISAFRPFKEAFIKDFTQDERELLVEAYKSGYKASQLDKVSKKWRDDPNPIDASYLADAFLREYRTIALKLSTALGKPFVNKFLNPKSETTMKDFMSSEKFVKKYRFTQKDNIKRTQELKSLLDQKRHFLGYLQVTGYWKDKLNDPLLPSKEVSFFVFQNEPSNSFNLKDQLLDLAKYFNQEAICYCQNAETGKVDLVLATEKDFGKVDMTFTGITFTIPLTQSITRLHNKVYTFFDKQGKDNYGVFFDELSTTKLKAMSIPKIADEFYRHLENRVKSFIRARQYHGSPRTFDADDIEKYELQAIKRLDLQRCAKSKSFKASYNHNIKINNLANALRQGKEVSKTLITKVLANTIDTDAGYCFISDLATQLGNISPRLSKSIVTAIEQAEGIRLLYALIDKVSYNSLHNTLNFIFDIDNPMSDQSLNELVVEVPREALKNVKLPQIKNELTSQIFDGAYQFRGNDYQFKG |
2JRM Chain:A ((1-60)) | --------------------------------------------------------------------------------------------------------------MKRQKRDRLERAQSQGYKAGLNGRSQEACPYQQVDARSYWLGGWRDARDEKQSGLYKLEH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 9027 for 360 contacts (25.1/contact) +
2D Compatibility (PS) -6462 + (NN) -3804 + (LL) 33368
1D Compatibility (HY) 2000 + (ID) 400
Total energy: 33729.0 ( 93.69 by residue)
QMean score : 0.115
|
|
|