Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKPFNSEQMAFLEELLSHQEKHLESKLSGFSVNDLDMQSVFRLERNRLKIAYRLLGLMSFIALVLAIVLISILPLQKTEHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKAQNSIYVQ--SHLEREVHIVNIAIYQQDNNPIASVSIA--AKLLNENKLVYEKRYKIVLSYLFDTPDF-DYASMPKNPTGFKITRYSITEIAPTNRND |
| 4AKZ Chain:A ((97-231)) | --------------------------------------------------------------------------------------------------------SYDTVMDKYWLSQYVIARETYDWYTLQKDYETVGMLSSPSEGQSYASQFQGDKALDKQYGSNVRTSVTIVSIV---PNGKGIGTVRFAKTTKRTNETGDGETTHWIATIGYQYVNPSLMSESARLTNPLGFNVTSYRVDPE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40098 for 842 contacts (-47.6/contact) +
2D Compatibility (PS) -13906 + (NN) -3553 + (LL) 10400
1D Compatibility (HY) -6000 + (ID) 1550
Total energy: -54707.0 ( -64.97 by residue)
QMean score : 0.361
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