Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANHKSAEKRIRQTIKRTERNRFYKTKVKNIIKAVREAVAINDVAKAQERLKIANKE---LHKFVSKGILKKNTASRKVSRLNASVKKIALA
2UXB Chain:T ((11-91))
-----SALKRHRQSLKRRLRNKAKKSAIKTLSK---KAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEA
General information:
TITO was launched using:
RESULT:
Template:
2UXB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3501 for 488 contacts (7.2/contact) +
2D Compatibility (PS) -8144 + (NN) -2647 + (LL) 816
1D Compatibility (HY) -1200 + (ID) 1600
Total energy: -9274.0 ( -19.00 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_2UXB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UXB-query.scw
PDB file :
Tito_Scwrl_2UXB.pdb
: