Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQLELFPIDLPYASAKEIAIAKMQHLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIGCQLGIDYQKKAVEYMAKR--VPNMELFVFCEDLKFTQNLDLGYPFMDMTTRDKDEEAYWDMLLMQSCKHGIIANSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
4CF7 Chain:A ((21-71)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------AKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHGNVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRLEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21681 for 266 contacts (-81.5/contact) +
2D Compatibility (PS) -5055 + (NN) -1617 + (LL) 10904
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -21149.0 ( -79.51 by residue)
QMean score : 0.338
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