Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKYHSDQEYEEIITDQLGDMQLRENLRSAMDTLRANRKNLLKNRYSEWENLRELGKEVKLKILSRLDEYLELFEKNATQNGFKIHYAKDGDEANEIIYNLAKEKNIKRILKQKSMASEEIGLNHYLKEKGIQAQETDLGELIIQLINEHPVHIVVPAIHKNRKQIGKIFEEKLNAAYEEEPEKLNAIARKHMRKEFESFKMGISGVNFAIANEGAIWLVENEGNGRMSTTACDVHVAICGIEKLVESFDDAAILNNLLAPSAVGVPITCYQNIITGPRKNDDLDGPKETHIILLDNNRSNILADEKYYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVS-------------PQLFGLNNYGHIPNLCSLCGRCTEVCPVEIPLAELIRDLRSDKVGEGRGVVKGAKSTQHSGMEKFSMKMFAKMASDGTKWRFQLKMAQFFSPLGKLLAPILPLVKEWASVRTLPNMDTSLHAKVQHLEGVIYE |
| 3P4R Chain:B ((141-225)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KYHQFSGCINCGLCYAACPQF------GLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWS-CTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIATLKPR------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74865 for 512 contacts (-146.2/contact) +
2D Compatibility (PS) -7126 + (NN) 367 + (LL) 27248
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -60276.0 ( -117.73 by residue)
QMean score : 0.378
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