Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENVPLSYDYSISKLFLYAMIAFGIIGMLIGIVLAFELSFPSLNYIAGEYGVFGRLRPLHTNAVIYGFTLGGIWASWYYIGQRVLKITYHQHPFLKIVGLLHFWLWILLLVLGVISLFAGLTQSKEYAELMWPLDIIVVVAWVLWGVNMFGSMSVRRENTIYVSLWYYIATYVGIAVMYIFNNLSIPTYFVADMGSVWHSISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPKESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYST--VPDWVQTLSSVFSVVLILPSWGTAINMLLTM---------RGQWHQLKESPLIKFLVLASTFYMLSTLEGS----IQAIKSVNALAHFTDWIIGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMMWRDVDQYGNLTY--QFIDTVK-ALIPY-YNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREPNYATPMAR |
| 3S3B Chain:A ((235-508)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WWTGHPIVYFWLLPA-YAIIYTILPKQAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADPGIDPTW-KMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTGKPIS-----DAQRRLGLAVVWLWFLGMMIMAV--GLHWAGLLNVPRRAYIAQVPDAYPHAAVPMVFNV--LAGIVLLVALLLFIYGLFSVLLSR---ERKPELAEAPLP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3S3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -180199 for 1928 contacts (-93.5/contact) +
2D Compatibility (PS) -25103 + (NN) 3771 + (LL) 19652
1D Compatibility (HY) -24400 + (ID) 3400
Total energy: -209679.0 ( -108.75 by residue)
QMean score : 0.239
|
|
|