Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MDLESLRGFAYAFFTILFTLFLYAYIFSMYRKQKKGIVDYERYGYLALNDALEDELIEPRHKEVHDKGIKES
2HJJ Chain:A ((10-75))
GPFTRRQAQAVTTTYSNITLEDDQGSH-FRLVVRDTEGRMVWRAWNF-------EPDAGEGLNRYIRTSGIRTD
General information:
TITO was launched using:
RESULT:
Template:
2HJJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22182 for 402 contacts (-55.2/contact) +
2D Compatibility (PS) -6804 + (NN) 372 + (LL) 864
1D Compatibility (HY) -400 + (ID) 350
Total energy: -28500.0 ( -70.90 by residue)
QMean score : 0.131
(partial model without unconserved sides chains):
PDB file :
Tito_2HJJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HJJ-query.scw
PDB file :
Tito_Scwrl_2HJJ.pdb
: