Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEVLMIEDDIELAEFLSEFLLQHGIHVINYDEPYTGISAANTQNYDLLLLDLTLPNLDGLEVCR--RISKQKHIPIIISSARSDVEDKIKALDYGADDYLPKPYDPKELLARIQSLLRRSHKKEEVSEPGDANIFRVDKDSREVYMHEKKLDLTRAEYEILSLLISKKGYVFSRESIAIESESINPESSNKSIDVIIGRLRSKIEKNPKQPQYIISVRGIGYKLEY
4QPJ Chain:C ((35-152))
-MRVLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGIDLGKLYDYDIILLDLNLPDMSGYEVLRTLRLSKVK-TPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVRR-----------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QPJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78018 for 890 contacts (-87.7/contact) +
2D Compatibility (PS) -12730 + (NN) -9068 + (LL) 7432
1D Compatibility (HY) -13600 + (ID) 2500
Total energy: -108484.0 ( -121.89 by residue)
QMean score : 0.703
(partial model without unconserved sides chains):
PDB file :
Tito_4QPJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QPJ-query.scw
PDB file :
Tito_Scwrl_4QPJ.pdb
: