Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAERFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDDVRKSYLDAGGDLKGSKGVPFEFLQESIKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANKI
1GVF Chain:A ((3-284))-IISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTY-NMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLG-----------SAFLTDPQEAKRFVELTGVDSLAVAIGTAHGL--YSKTPKIDFQRLAEIREVVDVPLVLHGASDVPD---------------------EFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRI


General information:
TITO was launched using:
RESULT:

Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156079 for 2368 contacts (-65.9/contact) +
2D Compatibility (PS) -29760 + (NN) -14517 + (LL) 988
1D Compatibility (HY) -25200 + (ID) 5550
Total energy: -230118.0 ( -97.18 by residue)
QMean score : 0.631

(partial model without unconserved sides chains):
PDB file : Tito_1GVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GVF-query.scw
PDB file : Tito_Scwrl_1GVF.pdb: