Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFASVLVQLKTLALEKIERKLESKRLELQQNEREVLDKQAQLSAFKNPELGGMSLFLQTQQLKSALRMEIEYYQQEGENLTKDLKILEKDYLLANQELEKAKIILEKEKQKEKEILEKKEQALLDENAMILHWQKGGLHA |
| 2K48 Chain:A ((41-100)) | -------------------QENITAHEQQLVTARQKLKDAEKAVEV--DPDDVNKSTLQNRRAAVSTLETKLGELKRQLADLVAAQKL------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21521 for 360 contacts (59.8/contact) +
2D Compatibility (PS) -7050 + (NN) -6808 + (LL) 8420
1D Compatibility (HY) 400 + (ID) 300
Total energy: 16183.0 ( 44.95 by residue)
QMean score : 0.530
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