Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQDLKEKPFIVSCWHGELGMIGFAYLRLQKPSVYVIASQHFDGSIAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWRLNTWDQFEIPKPFSEVRYYMLESVIIPKEWELSKAKEYLKTRMDSVGFEESQRGLGA |
| 3BGP Chain:A ((176-224)) | ---------------------------RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGT----------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13090 for 238 contacts (-55.0/contact) +
2D Compatibility (PS) -4891 + (NN) -218 + (LL) 11720
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -11729.0 ( -49.28 by residue)
QMean score : -0.107
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