Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYFKILATSFSL----------FLNSWLKRSKLSSVPFL--------SKRQISKSVQAIKIDANNKAIKYPPSVDNTVHNRMLSGSLNFNTENTNPKKNPTTTEKWIKF |
2KHV Chain:A ((1-106)) | MTFSECAALYIKAHRSSWKNTKHADQWTNTIKTYCGPVIGPLSVQDVDTKLIMKVLDPIWEQKPETASRLRGRIESVLDWATVRGYREGDNPARWRGYLEHHHHHH--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KHV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8313 for 550 contacts (15.1/contact) +
2D Compatibility (PS) -9149 + (NN) -4798 + (LL) 400
1D Compatibility (HY) 0 + (ID) 550
Total energy: -5784.0 ( -10.52 by residue)
QMean score : 0.373
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