Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLETLESILERLRMSIKKNGLKNSKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFICVLETSKSGRRYEIAAKEHHDHIICLHCGKIIEFADPEIEHRQNEVVKKYQAKLISHDMKMFVWCKECQESDD
3F8N Chain:A ((12-140))
----------------TLKETGVRITPQRHAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKELTYGDASSRFDFVTSDHY-HAICENCGKIVDFHYPGLDEVEQLAAHVTGFKVSHHRLEIYGVCQECS----
General information:
TITO was launched using:
RESULT:
Template:
3F8N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46513 for 787 contacts (-59.1/contact) +
2D Compatibility (PS) -13177 + (NN) 2364 + (LL) 1908
1D Compatibility (HY) -9200 + (ID) 1550
Total energy: -66168.0 ( -84.08 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_3F8N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F8N-query.scw
PDB file :
Tito_Scwrl_3F8N.pdb
: