Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGDKVVWVLKNNGEWQPFDVRNKKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLANGERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGK-TTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELRSSEAYDF-YNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIKHR |
4PHT Chain:A ((257-370)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILVTGPTGSGKSTTLYAGLQELNSNERNILTVEDPIEFDIDG-IGQTQVNPKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHL-VMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCQDCKEPYEADKEQRKLFAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58902 for 767 contacts (-76.8/contact) +
2D Compatibility (PS) -11854 + (NN) -3103 + (LL) 11680
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -70429.0 ( -91.82 by residue)
QMean score : 0.361
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