Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQSLREQKLLKILENDVLTILDSFSNYLFELREELDFIEEEMEGEITEQNLTALYDFSNFLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQDPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNNISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQIDMSVEAKKKELFEKYFQNIDEVTNKMLDQENQNKNSD |
| 1NKP Chain:B ((36-64)) | ---------------ASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 255 for 116 contacts (2.2/contact) +
2D Compatibility (PS) -3174 + (NN) -1924 + (LL) 16360
1D Compatibility (HY) 400 + (ID) 250
Total energy: 11667.0 ( 100.58 by residue)
QMean score : 0.370
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