Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELGNKNIKPGRKRVAVDELKRNFSVTFYLSKEEHDVLRRLADEEVESVNSFVKRHILKTIIYKKGTNQDSSINCDSSSRL
1BAZ Chain:A ((6-45))
---------------------KMPQVNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIGA------------
General information:
TITO was launched using:
RESULT:
Template:
1BAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5734 for 183 contacts (-31.3/contact) +
2D Compatibility (PS) -4377 + (NN) -1753 + (LL) 1652
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -13512.0 ( -73.84 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_1BAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BAZ-query.scw
PDB file :
Tito_Scwrl_1BAZ.pdb
: