Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNFFKKIVNKIKGEEVKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQLEVALLRFVRGESYYDKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNVQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIAHTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVFVEQ
1RJ9 Chain:A ((63-303))
-----------------------------------------DLKEAVKEKLVGMLEPDERRATLRKL-----GFNPQKPKPVEPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDSAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE------
General information:
TITO was launched using:
RESULT:
Template:
1RJ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151470 for 2023 contacts (-74.9/contact) +
2D Compatibility (PS) -26296 + (NN) -15067 + (LL) 4672
1D Compatibility (HY) -18400 + (ID) 5250
Total energy: -211811.0 ( -104.70 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1RJ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RJ9-query.scw
PDB file :
Tito_Scwrl_1RJ9.pdb
: