Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFYQKIYTHKVVFSSLFFLLFLFNVETLLFSHFSDDFSQLFFLFENHVYDFIIKLDYLGLIGVSSIYLLALILKPFTLTRQKCACIGILCLSFYAWNFPIKNSS--------IALYVFYFALLGTLLWRFLGASMKQSFLPSMNICVVWVFASSLQSFRFLSVSDCVDFSLFILALFLL-------ILVLIYHKRLFGLYEYANTLILIVGLCVVVLCSSMFIQTKEYYGMR-LGFYFLGLLGWLLEYI-HNTLRRLEHKI |
| 4U9P Chain:A ((7-241)) | ---------HMILLVSP------------------IDVEEAKEAIAGGADIIDVKNPKEGSLGANFPWMIKAIREVTPKDLLVSATVGDVPYKPGTISLAAVGAAISGADYIKVGLYGVKNYYQAVELMKNVVRAVKDIDENKIVVAAGYADAYRVGAVEPLIVPKIARDAGCDVAMLDTAIKDGKTLFDFQSKEILAEFVDEAHSYGLKCAL-------AGSIKKEHIPILKEIGTDIVGVRGAACGRIDRELVKELKELC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -351194 for 1837 contacts (-191.2/contact) +
2D Compatibility (PS) -21570 + (NN) 5213 + (LL) 3648
1D Compatibility (HY) 400 + (ID) 1350
Total energy: -364853.0 ( -198.61 by residue)
QMean score : 0.265
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