Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKIL----DQKHTEVCFNSAWLDALGAKGMIELCAK-FSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLLPEILLESDFDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVKGNYVIQLGKKRFMKLNIN |
| 1TYA Chain:E ((29-303)) | ------------------------------------ERVTLYCGFDPTADSLHIGHLAAILTMRRFQQAGHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIETG--ISFTEFSYMMLQAYDFLRLYETEGCRLQIGGSDQWGNITAGLELIRKTKG--RAFGLTIPLVTKADGT-KFGKTESGTIWLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQE-LREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRIS----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94945 for 1990 contacts (-47.7/contact) +
2D Compatibility (PS) -28003 + (NN) -10987 + (LL) 8748
1D Compatibility (HY) -12800 + (ID) 4150
Total energy: -142137.0 ( -71.43 by residue)
QMean score : 0.541
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