Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLEVSNQAKLPTQFGEFCIQCFREKGSNGSKDHLVIFTPNFP--QNPLVRL-----HSECLTGDALGSQKCDCGGALQMALERISKEGGLVIYLRQEGRGIGLFNKVNAYALQDKGYDTIQANEMIGFKDDERDYSIAGEILEYYRIKKMRLLTNNPLKIAALEKYAEVTRESLIVCANEHNQGYLEVKKLKMGHLL |
3CT4 Chain:A ((46-106)) | ---------------------------------GKVALVSGGGSGHEPAHAGFVGEGMLSAAVCGAIFTSPT---PDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENSLYTQGRRGVAGTVLVHKILGAAAHQEASLDEIKDLADKVVKNIKTIGLALSAATVPDNEIEYGVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16507 for 341 contacts (-48.4/contact) +
2D Compatibility (PS) -6007 + (NN) -2395 + (LL) 1924
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -25635.0 ( -75.18 by residue)
QMean score : 0.356
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