Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFLVKKIGVVIMILVCFLACSQESFIKMQKKAQEQENDGSKRPSYVDSDYEVFSETIFLQNMVYQPIEERNAFFQLTKDEDNSFNPENSVILLNEPSDNSEKNLLSYPNDPNNNEDNANNSQKNPFLYKPKRKTKNPKLIEYSQQDFYP----LKNGDIIMSKEGDQWLIEIQSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQIKGKISSY------VYTTNNGSLSLRPFYESFLLEKKSDNVYTIENKALDTMEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES |
2KJK Chain:A ((1-100)) | ----------------------------------------------------------------------------------------------------------------------------------MVKVTYDGVYVLSVKEDVPAAGILHAGDLITEIDGQSFK---SSQEFIDYIHSKKVGDTVKIKYKHGNKNEEASIKLTAIDKKGTPGIGITLVDDLEHHHHHH------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17827 for 473 contacts (37.7/contact) +
2D Compatibility (PS) -9735 + (NN) -5691 + (LL) 13420
1D Compatibility (HY) -800 + (ID) 550
Total energy: 14471.0 ( 30.59 by residue)
QMean score : 0.240
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