Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEALNALNQLNALHSKNAAHHFNATLPILLKVLEKQDKDLFLLQVGNRIIPTKSEQELKINQPYFAIMQRNQLGDIVLKNLVPAPKILDALDDLPVIEMKKLKEILSAKDNTPLKEYKELLSEKLIHAKSSQEFLNTANMLLSLQSQVLSFVVENERKKAFLQMKAKKQSVDFYALYPNLGEIGGVIYLKEKEKQLFLKTTLQRTKEVLKEAQNTLLGFSFVEIVCEKTPMLFAFEDRLLDTLG |
2RRL Chain:A ((86-135)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQSAQLRLHPEELGQVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLAESGIQLGQSSISSESFAGQQQSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9966 for 253 contacts (-39.4/contact) +
2D Compatibility (PS) -5323 + (NN) 367 + (LL) 14448
1D Compatibility (HY) 400 + (ID) 500
Total energy: -574.0 ( -2.27 by residue)
QMean score : 0.388
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