Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFINGFGRIGRCVLRAILERNDTNPQLEVIGINDPANWEILAYLLEHDSTHGLLNKEVRYSNGKLIIGSLEIPVFNSIKD---LK----GVGVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFLYQNQAIVSNASCTTNAIAPICAILDKAFSIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKALKDPINDLLITASKGTLKGVLEIDLKERVSSDFISNPNSVIIAPDLTFTL-ENMVKIMGWYDNEWGYSNRLVDMAQFMYHY |
| 4P8R Chain:A ((11-333)) | IRVGINGFGRIGRVVFRAAQRRND----IEIVGINDLLDADYMAYMLKYDSTHGRFEGAVEVQGGALVVNGKKIRV-TSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGP-----SKDDTPMFVMGVNHTTYKGEAIVSNASCTTNCLAPLAKVLNDKFGIVEGLMTTVHATTATQKTVDGPSQKDWRGGRGAAQNIIPSSTGAAKAVGKIIPSLNGKLTGMAFRVPTPNVSVVDLTVRLERPATYKQICDAIKAASEGELKGILGYVDEEIVSSDINGIPLTSVFDARAGISLNDNFVKLVSWYDNETGYSNKVLDLIAHITK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212969 for 2707 contacts (-78.7/contact) +
2D Compatibility (PS) -33238 + (NN) -3986 + (LL) 592
1D Compatibility (HY) -24000 + (ID) 6950
Total energy: -280551.0 ( -103.64 by residue)
QMean score : 0.503
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