Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFELTKKTKFDGEMIGYTEELLTFLVRDFFNGIFKSKVIPKMPIFCGDVKCEDFNALRSLVYLSVLELEETINPNKIPF
2KIN Chain:B ((23-49))
------------KTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNLELTAEE
General information:
TITO was launched using:
RESULT:
Template:
2KIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4714 for 115 contacts (-41.0/contact) +
2D Compatibility (PS) -2760 + (NN) -394 + (LL) 1180
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -8088.0 ( -70.33 by residue)
QMean score : 0.233
(partial model without unconserved sides chains):
PDB file :
Tito_2KIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KIN-query.scw
PDB file :
Tito_Scwrl_2KIN.pdb
: