Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSKKPHYRVSLSEQALNHEKLMRAIVKNLADTPMVLKGETALYLGYGLNRFSEDLDFDCHKKINLLGRVKSAIPNGIILNDIHIKKDTDSVGRYMVRYATKDNKEEQTLKLEISYRDAPKESEVNVIEGMRIAKIERIIDNKLCACFDGEH-----TRTKARDLFDLHFLAKHYEEHFNLDLASRLKDFSKDPDKLVSDYLVDVKLDALLNQIMDLEETALELGVMAQLIHKKLEKQSHSLNALQEQQGYSNNDNSLDNSNENTYTPKRRR |
3DWL Chain:F ((79-122)) | ------------------------------------------------------------------------------------------------------------------------------------VDEIERILVRKFMQFLMGRAESFFILRRKPVQGYDISFLITNYHTEEMLKHKLVDFIIEFMEEVDAEISEMKLFLNGRARLVAETYLSCF-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 424 for 164 contacts (2.6/contact) +
2D Compatibility (PS) -3860 + (NN) 1718 + (LL) 12508
1D Compatibility (HY) -4800 + (ID) 600
Total energy: 5390.0 ( 32.87 by residue)
QMean score : -0.095
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