Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLINAVIEKDENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKKNSVIAPIEIAFA
3KWR Chain:A ((9-66))
VKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFE-----QSLPPASDPQYWRLASTEF
General information:
TITO was launched using:
RESULT:
Template:
3KWR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40199 for 350 contacts (-114.9/contact) +
2D Compatibility (PS) -6461 + (NN) -2197 + (LL) 452
1D Compatibility (HY) 0 + (ID) 400
Total energy: -48805.0 ( -139.44 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3KWR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KWR-query.scw
PDB file :
Tito_Scwrl_3KWR.pdb
: