Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDKIRQVLPFHSGEILHPKIVKEIMENTLK
2DHY Chain:A ((29-49))
FPNMDYDIIECVLRANSGAVDATIDQLLQMNLESGPSSG----------------------
General information:
TITO was launched using:
RESULT:
Template:
2DHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12 for 81 contacts (-0.1/contact) +
2D Compatibility (PS) -2452 + (NN) -2807 + (LL) 1568
1D Compatibility (HY) -800 + (ID) 200
Total energy: -4703.0 ( -58.06 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_2DHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DHY-query.scw
PDB file :
Tito_Scwrl_2DHY.pdb
: