Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLVVDSFKD---TSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEEEGY-YNLKERYIPLVT--EISH---KQHI-LFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMRVPYIGSFHLQPEHISYNMKLGQFSWLNTMLFSWFKSSHYRYIHHIHCPSKFIVEELEKY-NY-GGKKYAISNGFDPM-FKFEHPQ------KSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSRY-K--QDIVLLLKGKGPDEKKIKLLAQKL--GVKTEF-GFVNSHELLEILKTCTLYAHTANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE--RSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 3C48 Chain:A ((21-433)) | MRVAMISMHTSPLQQ---GMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLS-GQVGWLLRDLWRIPLIHTAHTLAAVKNS-Y-----DTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPG---TERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS--DTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAA-RVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENVDGETHHG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167989 for 3058 contacts (-54.9/contact) +
2D Compatibility (PS) -40580 + (NN) -22581 + (LL) 672
1D Compatibility (HY) -7200 + (ID) 3050
Total energy: -240728.0 ( -78.72 by residue)
QMean score : 0.519
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