Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIKMAKDYGFCFGVKRAIQIAEKNQNSL-IFGS-------LIHNAKEINRLEKNFNVKIEEDPKKIPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQ---ALVVNSLEELQE--KKLQRKVALVSQTTKQTPKLLQIASYLVERCTEV--RIFNTICNATSYNQKAALDLSKEVDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENELELAWFKDKKLCGITAGASTPDWIIENVKQKISTI |
| 4H4D Chain:A ((9-290)) | MQILLANPRGFCAGVDRAISIVE---NALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQ-ISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87709 for 2198 contacts (-39.9/contact) +
2D Compatibility (PS) -28856 + (NN) -7646 + (LL) 28
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -144483.0 ( -65.73 by residue)
QMean score : 0.463
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