Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYIIGVFDLRSTIIPLIDLAKWIGIVPDKSKENERIVIITEFNNVKMGFLVHSARRIRRISWKDVEPASFSASNSINKENITGTTRIENDKTLLILDLESILDDLKLNEDAKSTKEDTPKERFEGEVLFLDDSRTARKTLKNHLSKLGFS-ITEAVDGEDGLNKLEMLFKKYGDDLRKHLKFIISDVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVK-FDAEKFTEEISKILDKNA |
3FGZ Chain:A ((8-125)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVVDDESTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQA--GGYG--------FVISDWMMPNMDGLELLKTIRADGAMSALPVLMVTARAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52485 for 889 contacts (-59.0/contact) +
2D Compatibility (PS) -12398 + (NN) -5928 + (LL) 13864
1D Compatibility (HY) -10000 + (ID) 2300
Total energy: -69247.0 ( -77.89 by residue)
QMean score : 0.716
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