Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLEQAFLKIIEKKHKELNLGQDYNAIF---SKIRDFEANAIGQIGEEFLKSVLNAIDEVINDGIIHDEYDIMTKSGVSFEVKTAQKGRTNNTFQFNGINPRYNYDFLICLGVCEDQLLYRIFKKDEIHYIHKERKYFMKQNEFKKQLVPMNPDNQVNDKLTLNLKELKEITNLIKELERILELD |
1XIN Chain:A ((335-380)) | -----AASKVAELKTPTLNPGEGYAELLADRSAFEDYDADAVGAKGFGFVKLNQLAIEHLLGAR------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2559 for 164 contacts (15.6/contact) +
2D Compatibility (PS) -4144 + (NN) 1439 + (LL) 8704
1D Compatibility (HY) -2000 + (ID) 800
Total energy: 5758.0 ( 35.11 by residue)
QMean score : 0.307
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