Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI-ECVEVLRCE---DFESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDFVQ--M-TNN-HWT-FSIET-TRQCLNLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGDYPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVM-KKTPGLDGAGIALENYLLHDRI |
| 2AA4 Chain:A ((1-288)) | ------MTTLAIDIGGTKLAAALIGAD-GQIRDRRELPTPASQTPEALRDALSALVSPLQ-A---HAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNL-PTIAINDAQAAAWAEFQALD-----------GDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGP--------VCGCGRTGCVEAIASGRGIAAAAQGELA-------------GADAKTIFTRAG-QGDEQAQQLIHRSARTLARLIADIKATTDCQ-CVVVGGSVGLA-EGYLA--LVETYLAQEP-A-AF--HVDLLAAHYRHDAGLLGAALLAQGE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181560 for 2385 contacts (-76.1/contact) +
2D Compatibility (PS) -28783 + (NN) -1349 + (LL) 4468
1D Compatibility (HY) 5200 + (ID) 2850
Total energy: -204874.0 ( -85.90 by residue)
QMean score : 0.295
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