Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNHTSSFGSFIAKNGFLNEKEVAQKFNDYIHDRDAQIWLMIMGYDLNKIEYVKANVLSGYKADVNVIIQIKMKQTLDSENLQVKLVSNLKGFNQIDKRKLRSYQEMWNIPPNIYQLFAYFTGELKPTRQDIKYPNKRMLAYEFTNKEQQELLAWLNDNKMLIVSDILKGRGEFSAEWVLVIQKINLNMKWALKNINEVMQHYLDDGIVEISKKGSLKIGRITIQRKGGDNGRESANMLQFKIDPTGLLG |
| 2EKD Chain:A ((53-84)) | ---------------------------------YEFYTRLKVAGFDVAPLENVQVIKMGG-TKDIGRVIGRLNISKYVISEQEYMEIVSQLKDYPVINPVLGLHKLILLGNTFENINVVKMVSNYVGREERIAFYFVNRNVIEKHSSPILDLLEEVVTSILEITDSGIIIKKSIKDEIAGKIVSPLL--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8474 for 149 contacts (-56.9/contact) +
2D Compatibility (PS) -3493 + (NN) -1660 + (LL) 6620
1D Compatibility (HY) -800 + (ID) 350
Total energy: -8157.0 ( -54.74 by residue)
QMean score : 0.186
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