Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDLKVISKHYAKALKNHTKSDLALLEEIVVGLKNLAEA----IKLHKLNQVLAHVSLKVKKEVVL--EILEKITPTKACSILKPVME------VVLKNNRLDMLELVAEEL------SFDSKRTL-----------EATLLVPQKLENNELEEVQQKLQARFNAPVEIAQ---------DTWSKKGVSLSVSSL---DLEIGFSKEDILKKIE----------------KQVIQ---SI- |
| 3DU1 Chain:X ((0-236)) | HMNVGEILRHYAAGKRNFQHINL---QEIELTNASLTGADLSYADLRQTRLGKSNFSHTCLREADLSEAILWGIDLSEA-DLYRAILREADLTGAKLVKTRLEEANLIKASLCGANLNSANLSRCLLFQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLHHANLDGAKLCRANFGRTIQWGNLAADLSGASLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIMPDGSIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 64524 for 1333 contacts (48.4/contact) +
2D Compatibility (PS) -16221 + (NN) 12244 + (LL) 552
1D Compatibility (HY) 9200 + (ID) 550
Total energy: 69749.0 ( 52.32 by residue)
QMean score : -0.190
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