Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDLSYSLERVLQEDPAARNKWEVLLLYPGIHALLCYRLAHALHK--RRFYFIARALSQLARFITGIEIHPGAKIGRGLFIDHGMGVVIGETTEIGDDVTIYHGVTL-------GGTGKFKGKRHPTLGNRVVVGAGAKVLGAICVGDDVRIGANAVVLSDLPTGSTAVGAKAKTITKDR
3P1B Chain:A ((115-269))
--------------DPAAPGLSLIIRCYPGFQAVIVYRIAHVLYECGERYY--CREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQE--VIKRGTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQTVYI----------
General information:
TITO was launched using:
RESULT:
Template:
3P1B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125295 for 1093 contacts (-114.6/contact) +
2D Compatibility (PS) -15605 + (NN) -8687 + (LL) 2296
1D Compatibility (HY) -15200 + (ID) 3450
Total energy: -165941.0 ( -151.82 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_3P1B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P1B-query.scw
PDB file :
Tito_Scwrl_3P1B.pdb
: