Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIK--------TAEQQNASDAEISHMKKQKLKLKDEIHSMIIEYREKQKSERA
3H2Q Chain:A ((47-99))
-VHEFGDNTAGCTSAGPHFNP------------RRVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKG
General information:
TITO was launched using:
RESULT:
Template:
3H2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3846 for 115 contacts (33.4/contact) +
2D Compatibility (PS) -3141 + (NN) 1191 + (LL) 948
1D Compatibility (HY) -1200 + (ID) 550
Total energy: 1094.0 ( 9.51 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_3H2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H2Q-query.scw
PDB file :
Tito_Scwrl_3H2Q.pdb
: