Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKKRVFSGIQPTGQIHLGNYLGAIKHWVELQDEYENLFCIVNSHAITLPIEPIFLKSQTYELVKLLLACGISPKQSGLFIQSEVDEHPALAWLLDCQVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILLYQSDLVPVGEDQKQHLELTRNVAEKFNRDFG---NCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFLLDEPDVIVKKIKKAATDSMGV--IAFD-ETREGVFNLLNIYMLLSDESPEKIEERFRN-KGYGDFKKELAEVVIQSLKPIQERYQEISDDE--VKAVLNCGAEKARPLARATYQKAKELMGLI |
3SZ3 Chain:A ((4-338)) | MSKPIVLSGVQPSGELSIGNYLGALRQWQQMQDDYDCQYCVVDLHAITVRQDPQALHEATLDALAICLAVGVDPKKSTLFVQSHVPEHAQLGWVLNCYTQMGELSRMTQFKDKSARYANDVNAGLFGYPVLMAADILLYGAHQVPVGSDQKQHLELARDIATRFNNIYSPEQPIFTIPEPYIPTVNARVMSLQDATKKMSKSDDNRKNVITLLEDPKSIIKKINKAQTDAETPPRIAYDVENKAGIANLMGLYSAATGKTFAEIEAQYAGVEMYGPFKKDVGEAVVAMLEPVQAEYQRIRNDREYLNSVMRDGAEKASAKALQTLKKVYAAVGFV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -172196 for 2605 contacts (-66.1/contact) +
2D Compatibility (PS) -34570 + (NN) -13164 + (LL) 0
1D Compatibility (HY) -30000 + (ID) 7500
Total energy: -257430.0 ( -98.82 by residue)
QMean score : 0.570
|
|
|