Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQAIYNETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVRNTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV
1WQG Chain:A ((13-185))
------------MEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV
General information:
TITO was launched using:
RESULT:
Template:
1WQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39014 for 1213 contacts (-32.2/contact) +
2D Compatibility (PS) -18732 + (NN) -6990 + (LL) 1184
1D Compatibility (HY) -10400 + (ID) 3250
Total energy: -77202.0 ( -63.65 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1WQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WQG-query.scw
PDB file :
Tito_Scwrl_1WQG.pdb
: