Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAISIKSPKEIKALRKAGELTAQALALLEREVRPGVSLLELDKMAEDFI-KSSHARPAFKGLYGFPNSVCMSLNEVVIHGIPTDY-VLQEGDIIGLDLGVEVDGYYGDSALTLPIGAISPQDEKLLACSKESLMHAISSIRVGMHFKELSQILEGAITERGFVPLKGFCGHGIGKKPHEEPEIPNYLEKGVKANSGPKIKEGMVFCLEPMVCQKQGEPKILADKWSVVSVDGLNTSHHEHTIAIVGNKAVILTER
1YVM Chain:A ((2-251))-AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGQGFHEEPQVLHYDSR----ETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLR


General information:
TITO was launched using:
RESULT:

Template: 1YVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119572 for 2166 contacts (-55.2/contact) +
2D Compatibility (PS) -27388 + (NN) -9533 + (LL) 436
1D Compatibility (HY) -18400 + (ID) 4850
Total energy: -179307.0 ( -82.78 by residue)
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_1YVM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YVM-query.scw
PDB file : Tito_Scwrl_1YVM.pdb: